Mail Buoy: December 6, 2011

Dear Kyriaki,

The location of dives and research depends on the scientific interests of researchers. In this cruise we are interested on organisms that live in the brines where high pressure/salinity and low oxygen conditions prevail. These conditions are present in DHABs of the Mediterranean, that’s why Atlantis left the United States, crossed the Atlantic Ocean and came (for its first time!) just 640 kilometers or 399 miles (considering a straight line) away from Kavala port. You can go to the main page of Dive and Discover and look for other interesting expeditions (under “Choose an Expedition”) or study sites (under “Dive into Deeper Discovery”). But this doesn’t mean that you always need to travel miles away to find an interesting ecosystem. Just look around you and I am sure you will find wonderful places to explore.

Dr. Konstantinos Kormas
University of Thessaly

What do you do with your findings? Devin B. of William Diamond Middle School in Lexington, MA, asked the same question some days before (Mail Buoy 12/2).

Well, the outcome of all analyses will be communicated in the scientific literature. In this website, we are trying to present the findings in a more simple-to-understand way. That’s why we encourage students to send their questions to the Mail Buoy.

Concerning our diet, we eat very well on board! Just go to mail buoy of 12/3 (Praskovia's question) and to the “What’s to eat?” link on the Daily Updates where you can see all the goods we get. Also, go to Sunday’s slideshow to see some wonderful pictures of people who take care of our diet.

Thanks for your questions! Keep tuning in!

Dr. Hera Karayanni
University of Ioannina


Hi Carlo,

Our in situ sampler uses polycarbonate filters that have a 0.65-micrometer pore size. This pore size catches all protists and bacteria except for those protists that lyse, or break up, upon filtration and those bacteria that are very small (under 1 micrometer in size). The filter is fixed at depth, or "in situ," hence the name “in situ sampler.” We perform different stains of nucleic acids and enzymes on the filters after the sampler is brought back on board the ship.

Dr. Bill Orsi
WHOI


Combining two questions with one answer:


Hello Vishnu and Sophia,

Extremophiles are organisms—mostly unicellular—that not only live beyond the environmental conditions that we, humans, live but also they require these extreme conditions for their growth. The investigation of these microorganisms provides us with clues on how life can be “as we do not know it.” For example, due to their high salt concentrations, the DHABs leave very little water available for the bacteria and the protists that live there. If we can prove that these extreme organisms are alive and kicking, then we might be able to unravel the mechanism on how a cell can survive with little or practically no water around it! Water is considered as a prerequisite—if not the most crucial ingredient of all—for “life as we know it on Earth,” but available water is rather scarce in the planetary bodies we have studied so far. So, now you can see some common features between microorganisms in DHABs and their extraterrestrial cousins (if they exist).

Dr. Konstantinos Kormas
University of Thessaly, Greece


Very interesting question! Thank you for asking, Sonia. Protists move in the seawater in relation to changing growth-related environmental factors such as light, nutrients, prey, organic carbon. In DHABs, they probably do the same in order to find their prey or avoid their grazers for example. “What happens if they stop moving?” We don’t know if and how they can regulate their buoyancy in this high-density environment. Probably when they stop moving they float at the “surface,” that means close to the halocline (the interface between the brine and the seawater) where bacteria—their potentially favorite prey— thrive. Further research is needed to understand the survival strategies of protists living in these extreme environments. We hope we'll get the answers in the future.

Dr. Hera Karayanni
University of Ioannina


Hello, Abby,
Yes, we spend the whole time at sea! If something serious happens, we may go to land. It happened to me twice. The first time was on a cruise in the Atlantic, when the cook broke his leg. The vessel had to dock in order for the cook to get medical treatment and also to be replaced by another cook! The second was in this cruise, when we had to deviate from our course in order to lead the rescued men to Kalamata port. However, even in these cases, crew and scientists are not allowed to disembark! So, we did not step on land since the beginning of the cruise.

Dr. Hera Karayanni
University of Ioannina


Hello Maxime,

Jason is mostly made of aluminum with some stainless steel and titanium. We put zinc all over the aluminum to keep it from wasting away. We are also very careful about inspecting it when it gets to the surface and thoroughly washing it off with soap and water. We are unable to make Jason sink very deep into the brine and we are unable to see much as soon as we get into it. We are mostly sampling the interface between the brine and the regular seawater. So we don't spend much time in the actual brine.

Tito Collasius
Jason Expedition Leader


Many of us have. Here are two tales of our experiences.

From Cathy Offinger, Jason team member:
In 2002, I was on a project in the Solomon Islands, looking for the remains of John F. Kennedy's PT-109.  We were using an Australian fishing boat, the Gray Scout, which we had converted to our research platform. After a successful mission, we packed up and secured our small remotely operated vehicle and all our gear, said farewell to most of the scientists, and took off to return to Gladstone, Australia (about 100 miles north of Sydney). There were four of us from the operations team in addition to the boat's captain and crew. Within 24 hours of our departure, we were being chased by a typhoon. We were all ordered to remain inside. It was far too dangerous to go outside. Twenty-foot seas were pushing and twisting us along. It took every bit of strength to stay wedged in our bunks, so we wouldn't be hurled across the room.

The ship's crew was not doing any better than the rest of us. The captain basically stood 24-hour watches to drive his boat. The cook managed to get up long enough to throw some food on the table three times a day for those of us who were not seasick. I don't recall what we ate, but I do know I was one of a very few who managed to reach the mess deck.

The sun shone brilliantly throughout our passage (which took five days!) which made it seem not so bad. Once we were safely back at the dock, I recall looking at the old wooden hull of Gray Scout and marveled that it actually made the transit and that we all had survived.

From Tito Collasius, Jason Expedition Leader
On my last cruise on the Atlantis, we experienced many storms. That was in the Pacific and the closest storm was Hurricane Jova. We had to keep Jason out of the water and tied down on deck and anything loose on the ship had to be tied down. It is pretty hard to sleep in very rough weather.


Hello Elizabeth,
We built Jason back at Woods Hole. We had built a few remotely operated vehicles before and learned quite a bit from each one. We took the lessons we learned and asked all of the scientists what they would like and went from there. As far as getting the weight right, we ballast the vehicle differently for each dive according to the depth of that dive, using steel plates.

Tito Collasius
Jason Expedition Leader




Dear Abby,
We filtered water from the halocline and brine over paper filters with 0.65 µm poresize. Protists were held back. Now we can isolate their genetic information and analyze their genetic code. Based on that we will be able to construct small gene code pieces, which we can connect to fluorescent dye. Under a special microscope we will be able to identify exactly those protistan cells from which we had before just the genetic information.

Can you imagine: Just with some genetic letters "AGTGGTGTTT..." we get to the protists and see their shapes.

But this is only one single aspect in the many upcoming projects that follow our expedition.

Thank you for your question. Keep tracking.

Lea Weinisch & Dr. Alexandra Stock
Technical University of Kaiserslautern,
Germany


 

 

 

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